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Add DINOv2Reg4 + PlantCLEF2024 (#2293)
* Add: DINOv2Reg4 with PlantCLEF2024 weights and example ( See https://arxiv.org/abs/2309.16588 and https://zenodo.org/records/10848263 ) * Remove extra files + update README to download them + remove extra lines * minor fix (README remove extra spaces) * minor fix (README: Fix image url) * Modif: Add back interpolate_pos_encoding() + fix when no interpolation + remove extra comments + Update README ( source image changed and so the predictions ) * Fix: Improve code lisibility with '$ cargo clippy' and '$ cargo fmt' * Another clippy fix. --------- Co-authored-by: x-VEspit <vincent.espitalier@cirad.fr> Co-authored-by: laurent <laurent.mazare@gmail.com>
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candle-examples/examples/dinov2reg4/README.md
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candle-examples/examples/dinov2reg4/README.md
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# candle-dinov2-reg4
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[DINOv2-reg4](https://arxiv.org/abs/2309.16588) is the lastest version of DINOv2 with registers.
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In this example, it is used as an plant species classifier: the model returns the
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probability for the image to belong to each of the 7806 PlantCLEF2024 categories.
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## Running some example
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```bash
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# Download classes names and a plant picture to identify
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curl https://huggingface.co/vincent-espitalier/dino-v2-reg4-with-plantclef2024-weights/raw/main/species_id_mapping.txt --output candle-examples/examples/dinov2reg4/species_id_mapping.txt
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curl https://bs.plantnet.org/image/o/bd2d3830ac3270218ba82fd24e2290becd01317c --output candle-examples/examples/dinov2reg4/bd2d3830ac3270218ba82fd24e2290becd01317c.jpg
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# Perform inference
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cargo run --example dinov2reg4 --release -- --image candle-examples/examples/dinov2reg4/bd2d3830ac3270218ba82fd24e2290becd01317c.jpg
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> Orchis simia Lam. : 45.55%
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> Orchis × bergonii Nanteuil: 9.80%
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> Orchis italica Poir. : 9.66%
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> Orchis × angusticruris Franch.: 2.76%
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> Orchis × bivonae Tod. : 2.54%
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```
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candle-examples/examples/dinov2reg4/main.rs
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candle-examples/examples/dinov2reg4/main.rs
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//! DINOv2 reg4 finetuned on PlantCLEF 2024
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//! https://arxiv.org/abs/2309.16588
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//! https://huggingface.co/spaces/BVRA/PlantCLEF2024
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//! https://zenodo.org/records/10848263
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#[cfg(feature = "mkl")]
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extern crate intel_mkl_src;
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#[cfg(feature = "accelerate")]
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extern crate accelerate_src;
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use clap::Parser;
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use candle::{DType, IndexOp, D};
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use candle_nn::{Module, VarBuilder};
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use candle_transformers::models::dinov2reg4;
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#[derive(Parser)]
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struct Args {
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#[arg(long)]
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model: Option<String>,
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#[arg(long)]
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image: String,
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/// Run on CPU rather than on GPU.
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#[arg(long)]
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cpu: bool,
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}
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pub fn main() -> anyhow::Result<()> {
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let args = Args::parse();
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let device = candle_examples::device(args.cpu)?;
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let image = candle_examples::imagenet::load_image518(args.image)?.to_device(&device)?;
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println!("loaded image {image:?}");
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let f_species_id_mapping = "candle-examples/examples/dinov2reg4/species_id_mapping.txt";
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let classes: Vec<String> = std::fs::read_to_string(f_species_id_mapping)
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.expect("missing classes file")
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.split('\n')
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.map(|s| s.to_string())
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.collect();
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let model_file = match args.model {
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None => {
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let api = hf_hub::api::sync::Api::new()?;
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let api =
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api.model("vincent-espitalier/dino-v2-reg4-with-plantclef2024-weights".into());
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api.get(
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"vit_base_patch14_reg4_dinov2_lvd142m_pc24_onlyclassifier_then_all.safetensors",
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)?
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}
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Some(model) => model.into(),
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};
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let vb = unsafe { VarBuilder::from_mmaped_safetensors(&[model_file], DType::F32, &device)? };
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let model = dinov2reg4::vit_base(vb)?;
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println!("model built");
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let logits = model.forward(&image.unsqueeze(0)?)?;
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let prs = candle_nn::ops::softmax(&logits, D::Minus1)?
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.i(0)?
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.to_vec1::<f32>()?;
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let mut prs = prs.iter().enumerate().collect::<Vec<_>>();
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prs.sort_by(|(_, p1), (_, p2)| p2.total_cmp(p1));
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for &(category_idx, pr) in prs.iter().take(5) {
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println!("{:24}: {:.2}%", classes[category_idx], 100. * pr);
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}
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Ok(())
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}
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